Human genetics

Embryo Formation

gastrulation in the second week

three-layered flat structure develops from ICM

primary germ layers form

ectoderm

mesoderm

endoderm

 

 

 

 

cells in each layer begin to form specific organs controlled by homeotic gene expression

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Supportive structures from trophoblast

support and protect the embryo

earlier

chorionic villi

yolk sac

allantois

 

 

 

later

umbilical cord

amniotic sac

placenta

2

The Primordial Embryo

germ layers develop into specific groups of structures

ectoderm

mesoderm

endoderm

Mistakes result in multiple births

dizygotic twins (fraternal)

two sperm fertilize two oocytes

same genetic relationship as any two siblings

 

monozygotic twins (identical)

both from a single fertilized ovum

identical genetically as clones

can be exposed to slightly different or same uterine environments

 

conjoined twins (MZ or DZ)

incomplete separation or fusion

of twins in uterine environment

Types of identical twins

Embryonic development

organogenesis

simple germ layers develop into distinct organs

 

organogenesis is complete by eighth week of gestation

Embryonic development

primitive streak develops into neural crest

stem cells along the back of the embryo

neural tube, notochord, heart, CNS, limbs, face, etc.

 

haploinsufficiencies of neural crest cells lead to defects

Treacher Collins syndrome is an autosomal dominant disorder of cranial neural crest cell development

Fetal growth after organogenesis

growth and maturation of organs

normal body proportions

bone replaces softer cartilage

nerve and muscle functions become coordinated

sex organs become more distinct by week 6

by week 12:

sucks thumb

kicks

makes fists and faces

beginnings of teeth

 

fetal movement may be

noticed by mother, monitored

 

Birth defects are possible

development takes 40 weeks

critical period of development in early weeks

genetic abnormalities, toxic substances, viruses

 

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teratogens are environmental agents that cause birth defects

Teratogens can cause birth defects

exposure to chemical or other agents

may depend on mother’s genotype

known teratogens include

thalidomide

cigarettes and alcohol

nutrients or vitamin deficiency

occupational hazards

viral infections

 

 

 

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fetal alcohol syndrome

phocomelia due to thalidomide exposure

amniotic bands due to constriction of amnion

spina bifida due to low levels of folic acid

Parent-of-origin effects due to methylation

parental origin influences phenotype

age of onset or symptom severity

 

mechanisms of parent-of-origin effects

differential genomic imprinting

can alter expression of gene

Genomic Imprinting

normal imprinting in genome

methylated DNA imprints

erased during meiosis

remethylated according to type of gamete

 

some genes normally methylated in females, some in males

Imprinting errors cause disease

imprinted region of chromosome 15

gene PWS methylated in eggs

gene AS (UBE3A) inactive in sperm

 

 

 

expression of a few genes surrounding PWS-IC

expression of large region at PWS-IC

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Imprinting errors cause disease

deletion of chromosome 15 imprinted region

Prader-Willi syndrome if deletion inherited from father (no active copy)

Angelman syndrome if deletion inherited from mother (no active copy)

 

Prader-Willi s. phenotype of obesity, NIDDM, excessive hunger, moodiness and conduct disorder

Angelman s. phenotype of failure to thrive, hyperactivity, muscle hypotonia, happy mood

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Importance of genomic imprinting

regulate abundance of key proteins in embryo

imprinted genes in clusters, controlled by imprinting centers

one gene in cluster could be essential

others imprinted in bystander effect

 

uniparental disomy

results in teratoma

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Changes in gene expression in development

over time, in different cell types

programmed differentiation of stem cells

 

cell, tissue, or organ/gland level

changes in sets of proteins available

everything in a cell is due to a gene product

 

inherited or acquired changes in gene expression: epigenetics

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Changes in gene expression in development

epigenetic changes

chromatin-based gene activation/silencing

changes to chemical groups associated with DNA

promote or restrict access of transcription machinery

changes replicated during synthesis phase

transmitted to daughter cells after cell division

nucleosomes pick up chemical modifications that enhance or resist condensation

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Changes in gene expression in development

hemoglobin switching in development

adult hemoglobin is a tetramer of

2 alpha chains (chm 11) and 2 beta chains (chm 16)

 

adult hemoglobin has a high cooperative affinity for oxygen

fetal hemoglobin has an even higher cooperative affinity for oxygen

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Developmental hemoglobin chain switching

gene switching responds to oxygen levels

embryonic – 2 epsilon (e) + 2 zeta (z)

fetal – 2 gamma (g) + 2 alpha (a)

adult – 2 beta (b) + 2 alpha (a)

about 99% of hemoglobin molecules by four years of age

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Changing gene expression in environment

teratogen exposure

e.g., folic acid supplementation

donates methyl groups for DNA methylation

Does excessive folic acid lead to overmethylation of genes?

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Our Proteomes Change Over Time

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